In news that will surprise only newborn babies and people who have been trapped in an underground cave for the past 12 months, Jon Heyman of SI.com is reporting that Mets’ manager Jerry Manuel and GM Omar Minaya will not return to the club next season.

The Mets are planning to go outside the organization for the GM position and are thought to be considering several people, including former Diamondbacks GM Josh Byrnes, White Sox assistant GM Rick Hahn and former A’s GM Sandy Alderson. Rangers GM Jon Daniels, a Bayside, Queens product, could be an intriguing option as he has an “out” in his Texas contract, but the new Rangers ownership group led by Chuck Greenberg has made it clear they want to retain him. Respected assistant GM John Ricco is expected to stay in his current role, but is said by people to fully understand the intention to go outside the organization for the GM position following a second straight losing season. The Mets are 77-82, an improvement from their 70-92 mark a year ago, but not enough to satisfy the club-owning Wilpons. They have missed the playoffs four straight seasons.

According to Heyman, the Mets may retain Minaya as a scout, which may or may not be a good thing. If someone has a skill, teams would be wise to retain that skill. But assuming he is relieved of his general manager duties, how would that work with him taking a lesser role? It would be like Michael Scott losing his branch manager position at Dunder Mifflin and returning to sales. Sure it could work, but would that create the best environment for all parties involved?

I also doubt the new GM would want Minaya hanging around, so maybe the best thing for the Mets would be if he just moved on. It’s been a tumultuous few years in New York and everyone needs a fresh start.

According to SI.com, the Mets have “tweaked” their offer to free agent Jason Bay to give him a possible five-year alternative and have jumped into the race for Matt Holliday.

Mets GM Omar Minaya and Bay’s agent, Joe Urbon, spoke at length on Tuesday. Minaya is thought to have signaled a willingness to go to a five-year deal (at slightly lower dollars per year than the original four-year offer for close to $65 million), but with Bay still believed to be seeking a six-year deal from them, the Mets apparently have decided to dip back in on Holliday. The Mets, who are now believed willing to go to about $75 million for five for Bay, originally concentrated on Bay in the hope that they might be able to sign him quicker.

Minaya is expected to talk to Holliday’s agent, Scott Boras, as soon as Wednesday. Mets people suggest there could be a trade option to fill their offensive gap, but it appears that Bay and Holliday are their two top targets to enhance their power.

SI.com also reports that the Mets are trying to wrap up a deal with catcher Bengie Molina, but that talks are at a standstill because Molina wants a three-year deal for as much as $20 million. But New York is only willing to do two years at $10 million for the 35-year-old backstop.

What’s interesting about SI.com’s report regarding Bay is that ESPN’s Buster Olney says the Mets are currently at four years for the former Red Sox (not five) and that the club isn’t actively involved in the Holliday sweepstakes.

The New York Daily News is reporting that Mets shortstop Jose Reyes may need to have surgery to repair his injured right hamstring.

Jose Reyes looks like he may be headed for surgery on his ailing right hamstring tendon. He felt discomfort Tuesday while trying to run and is due to be examined this afternoon.

It goes without saying that the 2009 MLB season has been an utter disaster for Reyes and the Mets. The 26-year old shortstop played in only 36 games this season, finishing with a .279 batting average in 147 at bats.

The problem with hamstring surgery for athletes is that they may never return to their full pre-injury flexibility and explosiveness. So even if Reyes does have successful surgery in terms of the hamstring tear healing, it doesn’t mean that he’ll be the same player he was before the injury.

This will be an interesting situation to follow this winter.

According to a report by the New York Post, Mets outfielder Gary Sheffield asked the club for a contract extension, they rejected, and now he’s threatening to leave the team and go home.

As of 6:30 p.m., one of the sources said, Mets officials and Sheffield were in discussions on how to move forward. Mets pitcher Tim Redding actually said he heard Sheffield had been released. But a Mets official told the Post that was inaccurate and that Sheffield had not been released.

Sheffield had been part of the original lineup for Thursday night’s game against the Braves. But Jerry Manuel said that Sheffield had pulled himself to clear his head.

It’s understandable that Sheffield wants an extension considering that his current contract is expiring and at his age, he’s looking for a little job security. He’s also hitting .285 with 10 home runs and 43 RBI, so he’s had a good season up to this point.

But it was highly unprofessional of him to remove himself from the starting lineup on Thursday because he’s upset with the front office. Just because he’s had a good year and has proven that he can still play at 40, doesn’t mean he’s entitled to put his personal desires above the team.

The Mets gave him a chance to continue his career after the Tigers released him in March and how does he repay them? By causing a stink because they won’t give him a contract extension. Seems selfish and immature on his part.

Sheffield has burned down bridges everywhere he’s gone and seems intent on doing that again in New York.

Even though Ryan Church is now a member of the Braves, he’s still reminded of how frustrating it was to play for the Mets and manager Jerry Manuel.

When Church’s former teammate David Wright suffered a concussion after he was hit in the head with a fastball by Giants starter Matt Cain in a game last weekend, Manuel said Wright was a “different animal” than Church when it comes to missing time due to a concussion. (Church missed much of last season after suffering two concussions.)

According to a report by ESPN.com, Church was upset with Manuel’s “different animal” comment.

“It just felt like a low blow,” Church said. “I saw it. I wasn’t happy. If he had a problem with me or anything like that, you’d think he’d tell it to my face. I had plenty of opportunity to talk while I was wearing that uniform. It just was like, all right, now that I’m wearing another one, why would he come out and say that?”

When he met with reporters before Tuesday night’s series opener against the Braves, Manuel was told that Church called the comments a “cheap shot.”

But Manuel said he meant no disrespect. He said he was simply trying to explain that the players involved were different, just like the concussions.

“There’s no ill intent,” Manuel said. “I don’t mean to take a shot at him. If that’s how he felt, I apologize to him. I like Ryan Church.”

Manuel and Church had bad blood before this incident and I don’t blame Church for feeling like Manuel took a cheap shot. Manuel wasn’t sensitive to Church’s injuries last year (the entire Mets’ staff mismanaged Church’s two concussions by making him available to pinch hitting him two days after the first injury and then putting him on a freaking plane to Colorado with post-concussion symptoms shorty after that) and isn’t being sensitive now in his comments. Because Church is in Atlanta now, Manuel probably feels as though he can take swipes at his former player without facing any repercussions.

Granted, the Mets have suffered an unusual amount of injuries this season, which have nothing to do with Manuel. But that doesn’t mean he deserves a mulligan for what has transpired this season. He’s a lousy manager and I would be shocked if the Mets didn’t fire him in the offseason.

Kevin Burkhardt of SportsNet New York is reporting that Mets shortstop Jose Reyes’ season could be over after flying back to the Big Apple on Tuesday to have team doctors examine his hamstring injury.

This is when you know Reyes’ season is over – he flew back to NY today to have Mets team doctors re-examine him for right leg discomfort.

The Mets have to shut this kid down for the rest of the season. If he needs surgery, it’s better to do it now than to wait hoping that Reyes can come back and the Mets can put together a feeble comeback.

What happens if he rushes back onto the field and winds up hurting his leg even more than it was? Reyes is a big part of the Mets’ future and while the situation must be frustrating to everyone involved, risking a bigger injury just isn’t worth it with New York currently sitting in fourth place in the NL East and 10 games back of the Phillies.

SI.com’s Andy MacPhail put together a small list of MLB teams that should either buy or sell as the trade deadline nears.

Of the teams he discussed (which also include the Blue Jays, Mariners, Orioles and Brewers), MacPhail seems to be way off in his assessment of the Mets:

Mets: SELL
44-48, 9 games back in East, 6 1/2 games back in wild card.
The Mets held on as long as they could without Jose Reyes and Carlos Delgado, but once Carlos Beltran joined them on the disabled list, their season was lost. Since all three will not be coming back anytime soon, it’s highly doubtful the Mets will be able to make a legitimate run at the postseason. There may not be much to sell on this team — the core is still very impressive — but dealing prospects or taking on salary with a team going nowhere has burned the Mets before, like in 2005 when they traded stud prospect Scott Kazmir to the Rays for the middling Victor Zambrano.

Just what do the Mets have to sell with all of their tradable pieces being on the DL? They’re obviously not going to trade David Wright, Johan Santana or Francisco Rodriguez, so who would they be able to offer in a trade – Gary Sheffield? Come on.

Unfortunately for the Mets, they’re stuck in a holding pattern right now. Reyes, Delgado, Beltran, John Maine, Billy Wagner and J.J. Putz are all currently on the DL with various alignments and with each passing day, they slip further and further out of contention. They’re just going to have to view this season as a wash and regroup for next year.

One thing is for sure though – they’re not going to be “selling” anything in the next two weeks.